[Taxacom] Honest question

David Campbell pleuronaia at gmail.com
Wed Dec 5 08:34:18 CST 2018


True; the self-published papers add a difficulty of locating them but are
not necessarily of lower quality than ones published elsewhere.

On Tue, Dec 4, 2018 at 5:31 PM Stephen Thorpe <stephen_thorpe at yahoo.co.nz>
wrote:

> It would be incorrect to think that bad taxonomy is restricted to
> "self-published papers". The academic peer review system is very far from
> perfect, with pressure to publish being put on authors from their employing
> institutions, and an increasing culture against criticising peers,
> particularly since reviewers also need to get their own stuff published
> under the same system (and "what goes around, comes around").
>
> Stephen
>
> --------------------------------------------
> On Wed, 5/12/18, David Campbell <pleuronaia at gmail.com> wrote:
>
>  Subject: Re: [Taxacom] Honest question
>  To:
>  Cc: "taxacom" <taxacom at mailman.nhm.ku.edu>
>  Received: Wednesday, 5 December, 2018, 11:18 AM
>
>  Another challenge is retroactive
>  results of establishing a standard.  Some
>  descriptions from the 1700's and 1800's
>  are great and some are not.  A new
>  rule can
>  be passed establishing stricter standards, but we have to
>  decide
>  what date the standards apply to - is
>  it just going forward, or do we set a
>  date
>  in the past, or what?  I can certainly think of several
>  authors whom I
>  sometimes wish could be put
>  onto a rejected list analogous to the list of
>  rejected works.  It would save the trouble of
>  checking through
>  self-published papers for
>  possibly valid names, but I can also think of
>  problems that would arise.
>
>  On Tue, Dec 4, 2018 at 5:09 PM Thomas Pape
>  <tpape at snm.ku.dk>
>  wrote:
>
>  > Dear Sergio,
>  >
>  > I will provide my
>  answers because you explicitly mention the ICZN, but I
>  > suppose your questions are equally valid
>  in relation to other organisms.
>  >
>  > >>> why do I now have to halt my
>  peer review publication ...
>  > You
>  don't. I may not get your point here, but I see nothing
>  that will
>  > prevent you from listing the
>  new species as an unrecognized species in
>  > genus B and go on with your work. I do
>  realise that poorly executed
>  > taxonomy
>  may be a considerable burden for those of us who have to
>  clean up
>  > the mess. It has always been
>  like that, and I suppose this is the onus we
>  > have to bear.
>  >
>  > >>> Why should I [...] move our
>  taxonomic knowledge of  the group further
>  > For my own part I find it deeply
>  fascinating to bring forth new taxonomic
>  > knowledge about that part of the planetary
>  biota that I work on.
>  >
>  > >>> when I feel like the  field
>  (ICZN) shows no support for  this sort of
>  > methodical work?
>  >
>  Could you elaborate on why you have this feeling?
>  > Also, be careful with how you define
>  "the field", as your focus is mostly
>  > on taxonomy, while the ICZN deals
>  exclusively with nomenclature. The
>  >
>  Commission certainly is compassionate and supportive about
>  quality in
>  > taxonomy, but which
>  particular "support" would you find appropriate
>  for the
>  > ICZN to provide?
>  >
>  > >>>
>  shouldn't the rules support accuracy in detriment of
>  shoddy work?
>  > This is often under
>  debate. The provisions and recommendations of the Code
>  > are deliberately not restricting the
>  freedom of taxonomic thought or
>  >
>  actions. The Code explicitly states that it has:
>  > "one fundamental aim, which is to
>  provide the maximum universality and
>  >
>  continuity in the scientific names of animals compatible
>  with the freedom
>  > of scientists to
>  classify animals according to taxonomic judgments".
>  >
>  > In short, the Code
>  does not and should not constrain or limit taxonomists
>  > to make taxonomic judgments.
>  > We have carefully written the Code to give
>  directions about quality,
>  > although this
>  is mostly in terms of recommendations, which are not part
>  of
>  > the legislative text. Also, by
>  defining certain requirements -- see for
>  > example what is required for a valid
>  designation of a neotype -- we hope to
>  >
>  indirectly increase 'quality decisions'.
>  >
>  > >>> What
>  regulations are there in the ICZN to protect young
>  taxonomists
>  > work
>  >
>  The Code is about nomenclature and not about taxonomy as a
>  (threatened)
>  > scientific discipline.
>  >
>  > >>> ... and
>  incentivise quality/accurate/comprehensive  taxonomic
>  work?
>  > It is important to see the Code
>  as a legislative text. Such texts rarely
>  > contain incentives.
>  >
>  It is important to realise, that regulations, directives,
>  guidelines or
>  > prescriptions on taxonomy
>  must come from other bodies than the ICZN. We
>  > take responsibility for the legislation
>  relating to the naming of animals.
>  >
>  > /Thomas Pape
>  >
>  >
>  >
>  >
>  -----Original Message-----
>  > From:
>  Taxacom <taxacom-bounces at mailman.nhm.ku.edu>
>  On Behalf Of Stephen
>  > Thorpe
>  > Sent: 4. december 2018 21:23
>  > To: taxacom at mailman.nhm.ku.edu;
>  Sergio Henriques <henriquesbio at gmail.com>
>  > Subject: Re: [Taxacom] Honest question
>  >
>  > Honest answer: The
>  issue is complex, but a partial answer is that, while
>  > it may be easy to distinguish best
>  practice from worst practice (of the
>  >
>  kind you describe), there is a continuum in between and so,
>  in practice, it
>  > is impossible to make a
>  robust good science/bad science distinction that is
>  > workable and fair to everyone. Bad science
>  often comes disguised as "good
>  >
>  science", i.e. in peer reviewed journals, backed up by
>  phylogenetic
>  > analysis, DNA, etc., etc.,
>  but with everyone too busy to pick through
>  > details, bad science (both deliberate
>  misrepresentation and just sloppy
>  >
>  mistakes) can and does easily get published in even the most
>  reputable
>  > journals.
>  >
>  > Stephen
>  >
>  >
>  --------------------------------------------
>  > On Wed, 5/12/18, Sergio Henriques <henriquesbio at gmail.com>
>  wrote:
>  >
>  >  Subject:
>  [Taxacom] Honest question
>  >  To: taxacom at mailman.nhm.ku.edu
>  >  Received: Wednesday, 5 December, 2018,
>  5:26 AM
>  >
>  >  Dear
>  all:
>  >
>  >  I missed
>  earlier debates on the topic
>  >  (I am
>  aware of a "recent" nature news
>  >  <
>  >
> https://www.nature.com/news/taxonomy-anarchy-hampers-conservation-1.22064>
>  >  and the "Taxonomy based on science
>  is
>  >  necessary for global
>  conservation
>  >  <
>  >
> https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2005075
>  > >"
>  >
>  response) but what happens when
>  >
>  taxonomy isn't based on science?
>  >
>  >  Hypothetical example: If someone
>  comes
>  >  to a protected area on
>  "vacation",
>  >  collects with
>  no permits, gets a couple  of specimens, self-publishes
>  > (no  peer review) a new species in genus
>  "A"
>  >  with 2 sp., instead of
>  the genus
>  >  "B" with 200 sp.
>  (where everyone can
>  >  easily recognise
>  it belongs to),
>  >  apparently to
>  purposely bypass a
>  >  cumbersome
>  revision/explanation and avoid  justifying the validity
>  of
>  > their  description.
>  >  Then why do I now have to halt my
>  peer
>  >  review publication, have the
>  burden
>  >  to revise further species in a
>  non
>  >  related genus A, accept their
>  species
>  >  name, lose my chance to set
>  the species  epithet as an honorific,
>  >
>  wasting  all the resources used to visit  museums,
>  collecting new
>  > material,  etc...
>  >  Just to publish a genus reassignment
>  >  paper?
>  >  Off course
>  my publication is still
>  >  relevant, I
>  made a key to both males and  females, spent endless hours
>  on
>  > range  mapping, validating or
>  refuting  synonyms, etc..
>  >  But as a
>  young taxonomist: Why do a
>  >  proper
>  revision at all? Why should I
>  >  publish
>  my work in peer review journals  and move our taxonomic
>  knowledge
>  > of  the group further, when
>  I feel like the  field (ICZN) shows no support
>  > for  this sort of methodical work?
>  >
>  >  Apologies for
>  turning this into a rant,  but I believe I'm perhaps
>  > offering  a new angle on an already well
>  known  problem, which I would
>  > phase
>  as:
>  >  Why should young biologists
>  become
>  >  taxonomist at all?
>  >  It's clearly not because of the
>  money,
>  >  nor because it's popular
>  or provides
>  >  any sort of professional
>  stability for
>  >  our future. I think
>  young
>  >  taxonomists do it because we
>  care, both  for the groups we study and for
>  > carrying the legacy of previous workers
>  onwards.
>  >  I know the role of the code
>  isn't to
>  >  police taxonomy but to
>  provide a
>  >  framework of rules do it
>  accurately,
>  >  but shouldn't the
>  rules support
>  >  accuracy in detriment
>  of shoddy
>  >  work?  What regulations
>  are there in the  ICZN to protect young
>  > taxonomists work  and incentivise
>  quality/accurate/comprehensive
>  >
>  taxonomic work?
>  >
>  >
>  Honest question, I really want to know.
>  >  Although I am also happy to hear
>  >  from those who think that encouraging
>  >  quality taxonomic work and supporting
>  >  young taxonomists isn't something
>  we
>  >  need to do, or that it isn't
>  something
>  >  ICZN should encourage.
>  >  I am aware of the Raymond Hoser
>  >  <
>  >
> https://blogs.scientificamerican.com/tetrapod-zoology/taxonomic-vandalism-and-hoser/
>  > >
>  >  issue,
>  >  the cyber nomenclaturalists and CESA
>  >  itch
>  >  <http://216.92.145.68/zootaxa/2011/f/zt02933p064.pdf>
>  >  and their "critics
>  >  <http://cerambycids.com/aazn/publications/Nemesio_2011.pdf>",
>  >  as well as
>  >  ICZN
>  position on it. But when facing a
>  >
>  taxonomy crisis
>  >  <
>  >
> https://www.britishecologicalsociety.org/systematics-and-taxonomy-in-crisis-house-of-lords-report/
>  > >,
>  >  I haven't
>  read about the impact of bad
>  >  taxonomy
>  in disincentivising young
>  >  taxonomists
>  and encouraging lower
>  >  publication
>  standards, and would welcome  your insights on this.
>  >
>  >  All the best
>  >  S.
>  >
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>  >  Nurturing Nuance
>  while Assaulting
>  >  Ambiguity for 31
>  Some Years, 1987-2018.
>  >
>  >
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>  > Nurturing Nuance
>  while Assaulting Ambiguity for 31 Some Years, 1987-2018.
>  >
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>  while Assaulting Ambiguity for 31 Some Years, 1987-2018.
>  >
>
>
>  --
>  Dr. David Campbell
>  Associate Professor, Geology
>  Department of Natural Sciences
>  Box 7270
>  Gardner-Webb
>  University
>  Boiling Springs NC 28017
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>  Nurturing Nuance while
>  Assaulting Ambiguity for 31 Some Years, 1987-2018.
>
>

-- 
Dr. David Campbell
Associate Professor, Geology
Department of Natural Sciences
Box 7270
Gardner-Webb University
Boiling Springs NC 28017


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