[Taxacom] Honest question

Stephen Thorpe stephen_thorpe at yahoo.co.nz
Tue Dec 4 16:31:42 CST 2018


It would be incorrect to think that bad taxonomy is restricted to "self-published papers". The academic peer review system is very far from perfect, with pressure to publish being put on authors from their employing institutions, and an increasing culture against criticising peers, particularly since reviewers also need to get their own stuff published under the same system (and "what goes around, comes around").

Stephen

--------------------------------------------
On Wed, 5/12/18, David Campbell <pleuronaia at gmail.com> wrote:

 Subject: Re: [Taxacom] Honest question
 To: 
 Cc: "taxacom" <taxacom at mailman.nhm.ku.edu>
 Received: Wednesday, 5 December, 2018, 11:18 AM
 
 Another challenge is retroactive
 results of establishing a standard.  Some
 descriptions from the 1700's and 1800's
 are great and some are not.  A new
 rule can
 be passed establishing stricter standards, but we have to
 decide
 what date the standards apply to - is
 it just going forward, or do we set a
 date
 in the past, or what?  I can certainly think of several
 authors whom I
 sometimes wish could be put
 onto a rejected list analogous to the list of
 rejected works.  It would save the trouble of
 checking through
 self-published papers for
 possibly valid names, but I can also think of
 problems that would arise.
 
 On Tue, Dec 4, 2018 at 5:09 PM Thomas Pape
 <tpape at snm.ku.dk>
 wrote:
 
 > Dear Sergio,
 >
 > I will provide my
 answers because you explicitly mention the ICZN, but I
 > suppose your questions are equally valid
 in relation to other organisms.
 >
 > >>> why do I now have to halt my
 peer review publication ...
 > You
 don't. I may not get your point here, but I see nothing
 that will
 > prevent you from listing the
 new species as an unrecognized species in
 > genus B and go on with your work. I do
 realise that poorly executed
 > taxonomy
 may be a considerable burden for those of us who have to
 clean up
 > the mess. It has always been
 like that, and I suppose this is the onus we
 > have to bear.
 >
 > >>> Why should I [...] move our
 taxonomic knowledge of  the group further
 > For my own part I find it deeply
 fascinating to bring forth new taxonomic
 > knowledge about that part of the planetary
 biota that I work on.
 >
 > >>> when I feel like the  field
 (ICZN) shows no support for  this sort of
 > methodical work?
 >
 Could you elaborate on why you have this feeling?
 > Also, be careful with how you define
 "the field", as your focus is mostly
 > on taxonomy, while the ICZN deals
 exclusively with nomenclature. The
 >
 Commission certainly is compassionate and supportive about
 quality in
 > taxonomy, but which
 particular "support" would you find appropriate
 for the
 > ICZN to provide?
 >
 > >>>
 shouldn't the rules support accuracy in detriment of
 shoddy work?
 > This is often under
 debate. The provisions and recommendations of the Code
 > are deliberately not restricting the
 freedom of taxonomic thought or
 >
 actions. The Code explicitly states that it has:
 > "one fundamental aim, which is to
 provide the maximum universality and
 >
 continuity in the scientific names of animals compatible
 with the freedom
 > of scientists to
 classify animals according to taxonomic judgments".
 >
 > In short, the Code
 does not and should not constrain or limit taxonomists
 > to make taxonomic judgments.
 > We have carefully written the Code to give
 directions about quality,
 > although this
 is mostly in terms of recommendations, which are not part
 of
 > the legislative text. Also, by
 defining certain requirements -- see for
 > example what is required for a valid
 designation of a neotype -- we hope to
 >
 indirectly increase 'quality decisions'.
 >
 > >>> What
 regulations are there in the ICZN to protect young
 taxonomists
 > work
 >
 The Code is about nomenclature and not about taxonomy as a
 (threatened)
 > scientific discipline.
 >
 > >>> ... and
 incentivise quality/accurate/comprehensive  taxonomic
 work?
 > It is important to see the Code
 as a legislative text. Such texts rarely
 > contain incentives.
 >
 It is important to realise, that regulations, directives,
 guidelines or
 > prescriptions on taxonomy
 must come from other bodies than the ICZN. We
 > take responsibility for the legislation
 relating to the naming of animals.
 >
 > /Thomas Pape
 >
 >
 >
 >
 -----Original Message-----
 > From:
 Taxacom <taxacom-bounces at mailman.nhm.ku.edu>
 On Behalf Of Stephen
 > Thorpe
 > Sent: 4. december 2018 21:23
 > To: taxacom at mailman.nhm.ku.edu;
 Sergio Henriques <henriquesbio at gmail.com>
 > Subject: Re: [Taxacom] Honest question
 >
 > Honest answer: The
 issue is complex, but a partial answer is that, while
 > it may be easy to distinguish best
 practice from worst practice (of the
 >
 kind you describe), there is a continuum in between and so,
 in practice, it
 > is impossible to make a
 robust good science/bad science distinction that is
 > workable and fair to everyone. Bad science
 often comes disguised as "good
 >
 science", i.e. in peer reviewed journals, backed up by
 phylogenetic
 > analysis, DNA, etc., etc.,
 but with everyone too busy to pick through
 > details, bad science (both deliberate
 misrepresentation and just sloppy
 >
 mistakes) can and does easily get published in even the most
 reputable
 > journals.
 >
 > Stephen
 >
 >
 --------------------------------------------
 > On Wed, 5/12/18, Sergio Henriques <henriquesbio at gmail.com>
 wrote:
 >
 >  Subject:
 [Taxacom] Honest question
 >  To: taxacom at mailman.nhm.ku.edu
 >  Received: Wednesday, 5 December, 2018,
 5:26 AM
 >
 >  Dear
 all:
 >
 >  I missed
 earlier debates on the topic
 >  (I am
 aware of a "recent" nature news
 >  <
 > https://www.nature.com/news/taxonomy-anarchy-hampers-conservation-1.22064>
 >  and the "Taxonomy based on science
 is
 >  necessary for global
 conservation
 >  <
 > https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2005075
 > >"
 > 
 response) but what happens when
 > 
 taxonomy isn't based on science?
 >
 >  Hypothetical example: If someone
 comes
 >  to a protected area on
 "vacation",
 >  collects with
 no permits, gets a couple  of specimens, self-publishes
 > (no  peer review) a new species in genus
 "A"
 >  with 2 sp., instead of
 the genus
 >  "B" with 200 sp.
 (where everyone can
 >  easily recognise
 it belongs to),
 >  apparently to
 purposely bypass a
 >  cumbersome
 revision/explanation and avoid  justifying the validity
 of
 > their  description.
 >  Then why do I now have to halt my
 peer
 >  review publication, have the
 burden
 >  to revise further species in a
 non
 >  related genus A, accept their
 species
 >  name, lose my chance to set
 the species  epithet as an honorific,
 >
 wasting  all the resources used to visit  museums,
 collecting new
 > material,  etc...
 >  Just to publish a genus reassignment
 >  paper?
 >  Off course
 my publication is still
 >  relevant, I
 made a key to both males and  females, spent endless hours
 on
 > range  mapping, validating or
 refuting  synonyms, etc..
 >  But as a
 young taxonomist: Why do a
 >  proper
 revision at all? Why should I
 >  publish
 my work in peer review journals  and move our taxonomic
 knowledge
 > of  the group further, when
 I feel like the  field (ICZN) shows no support
 > for  this sort of methodical work?
 >
 >  Apologies for
 turning this into a rant,  but I believe I'm perhaps
 > offering  a new angle on an already well
 known  problem, which I would
 > phase
 as:
 >  Why should young biologists
 become
 >  taxonomist at all?
 >  It's clearly not because of the
 money,
 >  nor because it's popular
 or provides
 >  any sort of professional
 stability for
 >  our future. I think
 young
 >  taxonomists do it because we
 care, both  for the groups we study and for
 > carrying the legacy of previous workers 
 onwards.
 >  I know the role of the code
 isn't to
 >  police taxonomy but to
 provide a
 >  framework of rules do it
 accurately,
 >  but shouldn't the
 rules support
 >  accuracy in detriment
 of shoddy
 >  work?  What regulations
 are there in the  ICZN to protect young
 > taxonomists work  and incentivise 
 quality/accurate/comprehensive
 >
 taxonomic work?
 >
 > 
 Honest question, I really want to know.
 >  Although I am also happy to hear
 >  from those who think that encouraging
 >  quality taxonomic work and supporting
 >  young taxonomists isn't something
 we
 >  need to do, or that it isn't
 something
 >  ICZN should encourage.
 >  I am aware of the Raymond Hoser
 >  <
 > https://blogs.scientificamerican.com/tetrapod-zoology/taxonomic-vandalism-and-hoser/
 > >
 >  issue,
 >  the cyber nomenclaturalists and CESA
 >  itch
 >  <http://216.92.145.68/zootaxa/2011/f/zt02933p064.pdf>
 >  and their "critics
 >  <http://cerambycids.com/aazn/publications/Nemesio_2011.pdf>",
 >  as well as
 >  ICZN
 position on it. But when facing a
 > 
 taxonomy crisis
 >  <
 > https://www.britishecologicalsociety.org/systematics-and-taxonomy-in-crisis-house-of-lords-report/
 > >,
 >  I haven't
 read about the impact of bad
 >  taxonomy
 in disincentivising young
 >  taxonomists
 and encouraging lower
 >  publication
 standards, and would welcome  your insights on this.
 >
 >  All the best
 >  S.
 > 
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 >  Nurturing Nuance
 while Assaulting
 >  Ambiguity for 31
 Some Years, 1987-2018.
 >
 >
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 > Nurturing Nuance
 while Assaulting Ambiguity for 31 Some Years, 1987-2018.
 >
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 > Nurturing Nuance
 while Assaulting Ambiguity for 31 Some Years, 1987-2018.
 >
 
 
 -- 
 Dr. David Campbell
 Associate Professor, Geology
 Department of Natural Sciences
 Box 7270
 Gardner-Webb
 University
 Boiling Springs NC 28017
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