polarized and unpolarized
Pierre Deleporte
Pierre.Deleporte at UNIV-RENNES1.FR
Mon Jan 14 18:48:24 CST 2002
At 17:02 09/01/2002 +1000, Larissa Vasilyeva wrote:
>2. He [Pierre Deleporte] wrote that different states are given a
>different weight, but, actually, states of the same character are of equal
>weight since 'weight' of a character means its position in a hierarchy.
In fact I wrote:
"In phylogenetic inference, ordering characters is a coding procedure
consisting in giving a different weight to changes between different states
of a character".
The key word is "changes". I was speaking of weight of transitions between
character states, i.e. weight of "steps" for parsimony analysis, but
neither "weight of characters" nor "weight of character states" properly.
> (If two genera differ in some character, and one genus possesses a
> primitive state of this character, while another genus has an advanced
> state, one can trace a phylogenetic line but both states are equal in
> level, consequently in weight).
I did not mean this at all, but "weighting changes" (steps). Character
ordering, in cladistic jargon, consist in giving increasing weight to steps
between character states more distant in the "order" (=unpolarized sequence
of states).
"Unordered" characters mean that for such characters all changes (= steps)
between any two states are given equal weight for calculating tree length.
Talking of "character weighting" instead of "character steps weighting" may
be misleading.
Best wishes,
Pierre
Pierre Deleporte
CNRS UMR 6552 - Station Biologique de Paimpont
F-35380 Paimpont FRANCE
Téléphone : 02 99 61 81 66
Télécopie : 02 99 61 81 88
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